kMer
Introduction
Installation
Dependencies
Latest kMer release
kMer development version
Methodology
k
-mer counting
Distance metrics
Strand balance
Profile shrinking
Scaling and smoothing
Tutorial
k
-mer counting
Merging profiles
Distance between profiles
Enforcing strand balance
Custom merge functions
Using the Python library
k
-mer profiles
Storing
k
-mer profiles
Differences between
k
-mer profiles
API reference
k
-mer profiles
k
-mer profile distances
Metrics
Development
Contributing
Documentation
Unit tests
Coding style
Versioning
Release procedure
k
-mer profile file format
Versioning
Current version: 1.0.0
Changes from older versions
Changelog
Version 1.0.1
Version 1.0.0
Support Python 3.3 and 3.4
Generalize custom function arguments
Version 0.3.0
Version 0.2.0
Version 0.1.0
Copyright
Authors
License
kMer
Docs
»
Welcome to kMer’s documentation!
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Welcome to kMer’s documentation!
¶
kMer is an analysis toolkit and Python programming library for
k
-mer profiles.
User’s guide
¶
Introduction
Installation
Dependencies
Latest kMer release
kMer development version
Methodology
k
-mer counting
Distance metrics
Strand balance
Profile shrinking
Scaling and smoothing
Tutorial
k
-mer counting
Merging profiles
Distance between profiles
Enforcing strand balance
Custom merge functions
Using the Python library
k
-mer profiles
Storing
k
-mer profiles
Differences between
k
-mer profiles
API reference
¶
API reference
k
-mer profiles
k
-mer profile distances
Metrics
Additional notes
¶
Development
Contributing
Documentation
Unit tests
Coding style
Versioning
k
-mer profile file format
Versioning
Current version: 1.0.0
Changes from older versions
Changelog
Version 1.0.1
Version 1.0.0
Version 0.3.0
Version 0.2.0
Version 0.1.0
Copyright
Authors
License
Indices and tables
¶
Index
Module Index
Search Page
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Versions
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stable
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